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Description: 

Parallel software to compute a complete backtranslation of short peptides to select probes for functional microarrays. P-MetaStackPrt uses meta-programming and a model driven engineering approach to automatically generate source codes to perform complete backtranslation on different architectures: PCs, Symmetric Multiprocessors servers, computing clusters, or a computing grid. P-MetaStackPrt is filtering the generated oligonucleotides with usual selection criteria for the design of microarray probes. It can be easily integrated in probe design software for functional microarrays.

 Publication :
    Jaziri, F., Peyretaillade, E., Peyret, P. and Hill, DRC (2014) High Performance Computing of Oligopeptides Complete Backtranslation applied to DNA microarray probe design. Concurrency and Computation: Practice and Experience, DOI: 10.1002/cpe.3412, 19p.

 

Conditions d'accès: 

Gratuit

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