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Description: 

PANAM  makes it possible to analyse a large dataset of 18S rRNA in a simple and rapid way. It assigns taxonomy to reads generated by next generation sequencing technologies or to near-full-length sequences, and permits to define environmental clades. A readme file text that contains instructions to set up PANAM is available in the package (Taib et al. 2013).

    Publication :
    Taib, N., J. F. Mangot, I. Domaizon, G. Bronner, and D. Debroas (2013) Phylogenetic affiliation of SSU rRNA genes generated by massively parallel sequencing: new insights into the freshwater protist diversity. PloS one 8:e58950.

 

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